If Now you have definitively eliminated the "ignition factor", right, you have now a mechanical problem. A friend of mine, a mechanic who propare many racing cars with carbs and distributor, two months ago have had a similar problem but at higher rpms, he tried some possibilities for resolve this problem, he tried increasing the length of the runners (about 1 cm extra), re calibrated the advance/retard of the Camshaft (single) and the inclination of the carbs, After some tests he has founded the right combination to solve the problem and finded more power too.
The cams do you have, are well indicated for your engine state of tune?
Some cams are more indicated with certanly engine mods, with others mods they don't made the optimal potential. If you can advance/retard the cams by a little, you can investigate the engine reactions. The cams is best to install using the wheel degree placed in the Crankshaft and using the gauges for find the TDC of the cylinder 1 and the correct aperture of the valves, take a look at this articles (my english isn't soo good for explain this important procedure):
http://www.hotrodder.com/kwkride/degree.html
http://www.ridgecrest.ca.us/~biesiade/camdegree.htm
http://buickperformance.com/camdegree.htm
http://www.thedirtforum.com/degree.htm
cheers,
